Thursday, 27 May 2010

M.smegmatis Mpr protein alignment with M.ulcerans and M.marinum proteins




1-By BugView software (open source) I have compared Mpr protein from M. smegmatis str. MC2 155 with genomes of M.ulcerans Agy99 and M.marinum M.

2-By Geneious software ( commercial software) I have studied the proteins that have a correlation with Mpr protein:

MUL 3786- 4227021:4227812 proline rich membrane protein

MMAR_3854 - 4791940: 4792731 proline rich membrane protein




Alignments




By Gepard software (open source) : Dot plot