Saturday, 6 February 2010

To explore Mycobacterium ulcerans by "In Silico". Step 2



*It is possible to show the genome map of Mycobacterium ulcerans by Bacmap:


Open
Bacmap

Choose letter
M

Choose Mycobacterium ulcerans

Open Map , now the genome map is showing.


Remember :
COGs
means Clusters of Orthologous Groups of proteins.

The genome is divided in COGs ( groups of proteins with different action).

CDS is the coding sequence or the portion of a nucleotide sequence that makes up the triplet codons that actually code for amino acids.



*By BuruList it is possible to get a lot of information on Mycobacterium ulcerans
genes:

write in the window Gene name:
mlsA1

open and the page is showing


Remember :

contig is a Group of cloned (copied) pieces of DNA representing overlapping regions of a particular chromosome.